PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G435000.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 135aa    MW: 15028.4 Da    PI: 9.2568
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G435000.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.0002245732154
                       HHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH 21 eeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       ++L++l+ +       K + a++L +A+eYIk L
  Aqcoe2G435000.4.p 45 ATLQQLVSPF-----DKTDTASVLFEAMEYIKFL 73
                       5677777774.....59***************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.9E-72383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-102385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.3912473IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MTEHKRRPAS LEPAVSLSCG TRQRYKTEVP ISRKEKKEIM GERVATLQQL VSPFDKTDTA  60
SVLFEAMEYI KFLHDQVKVL SAPYLLSAST REMQESALFD LRNHGLCLVP ISCTLRVTRA  120
NGADIWASMK GSAL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006355785.19e-55PREDICTED: transcription factor bHLH113-like
RefseqXP_006355784.19e-55PREDICTED: transcription factor bHLH113-like
RefseqXP_006355783.19e-55PREDICTED: transcription factor bHLH113-like
SwissprotQ9LT671e-32BH113_ARATH; Transcription factor bHLH113
TrEMBLM1B6369e-55M1B636_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000378993e-54(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.52e-42bHLH family protein